Low Coverage Genome Sequencing - SRA

SRX195244: Low Coverage Genome Sequencing
8 ILLUMINA (Illumina HiSeq 2000) runs: 16.6M spots, 3.4G bases, 1.6Gb downloads

UUID: 8cdcd888-4753-4414-bb34-c361fbc923b0

Design: Low Coverage Genome Sequencing

Submitted by: Broad Institute (BI)

Study: Whole genome sequencing of (CHS) Southern Han Chinese population HapMap population

PRJNA41139 • SRP001293 • All experiments • All runs

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The purpose of the project is to support the discovery and understanding of genetic variants that influence human disease. DNA for this sample was extracted from lymphoblastoid cell line.

Sample: Coriell HG00409

SAMN01036839 • SRS344107 • All experiments • All runs

Organism: Homo sapiens

Library:

Name: Sage-109727

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 4 attributes...) (hide...)

lsid: broadinstitute.org:bsp.prod.sample:3DAZ9

project: G22823

sample_barcode: 219780.0

work_request: 31670

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2012-08-27 22:01:52.0	GAPipeline	RTA1.13.48	Sequencer Application 1.5.15.1

Runs: 8 runs, 16.6M spots, 3.4G bases, 1.6Gb

Run	# of Spots	# of Bases	Size	Published
SRR592168	2,076,015	419.4M	199.7Mb	2012-10-15
SRR593444	2,079,969	420.2M	203.6Mb	2012-10-16
SRR593532	2,076,971	419.5M	201Mb	2012-10-16
SRR593787	2,077,909	419.7M	202Mb	2012-10-17
SRR593859	2,040,912	412.3M	200.1Mb	2012-10-17
SRR593893	2,064,921	417.1M	200.9Mb	2012-10-17
SRR594008	2,051,283	414.4M	196.4Mb	2012-10-17
SRR594010	2,160,135	436.3M	211.7Mb	2012-10-17

ID:: 258255

SRA

Sequence Read Archive

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